I hate to tell you this, but it is a long and complicated process. At least it was for me. I got Coppermine changed to almost the colors I wanted for fiblack.
You can see it here:
http://www.bootleghollow.com
The changes have to be made in the
modules/coppermine/themes/style.css and in the
modules/coppermine/themes/template.html
I just played around with each setting until it came out right. The easiest way I found was to open up a program like Dreamweaver, and look at the individual settings on the css. I tried to match them to the colors found in
themes/fiblack/styles/styles.css
Hope this helps a little.